CiteULike: Fully Automated = Instrumentation for Analysis in C elegans

Fully Automated Instrumentation for = Analysis in C=20 elegans

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International C. elegans Meeting = (2001) Key:=20 citeulike:3300505

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WormBase, DeepDyve

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').addClass(o.starClass);=0A= var $a =3D $('').attr('title', o.showTitles ? el.title : = '').text(el.value);=0A= =0A= /*=0A= * Prepare division settings=0A= */=0A= if(o.split) {=0A= var oddeven =3D (starId % o.split);=0A= var stwidth =3D Math.floor(o.starWidth / o.split);=0A= $s.width(stwidth);=0A= $a.css('margin-left', '-' + (oddeven * stwidth) + 'px');=0A= }=0A= =0A= starId++;=0A= return $s.append($a).get(0);=0A= });=0A= =0A= /*=0A= * How many Stars?=0A= */=0A= o.items =3D starId;=0A= =0A= /*=0A= * Remove old content=0A= */=0A= o.isSelect ? this.$selec.remove() : this.$rboxs.remove();=0A= =0A= /*=0A= * Append Stars interface=0A= */=0A= this.$cancel =3D $('

').addClass(o.cancelClass).append( = $('').attr('title', o.showTitles ? o.cancelTitle : = '').text(o.cancelValue) );=0A= o.cancelShow &=3D !o.disabled && !o.oneVoteOnly;=0A= o.cancelShow && this.element.append(this.$cancel);=0A= this.element.append(this.$stars);=0A= =0A= /*=0A= * Initial selection=0A= */=0A= if(o.checked =3D=3D=3D undefined) {=0A= o.checked =3D -1;=0A= o.value =3D o.defaultValue =3D o.cancelValue;=0A= o.title =3D '';=0A= }=0A= =0A= /*=0A= * The only FORM element, that has been linked to the stars control. = The value field is updated on each Star click event=0A= */=0A= this.$value =3D $("");=0A= this.element.append(this.$value);=0A= =0A= =0A= /*=0A= * Attach stars event handler=0A= */=0A= this.$stars.bind('click.stars', function(e) {=0A= if(!o.forceSelect && o.disabled) return false;=0A= =0A= var i =3D self.$stars.index(this);=0A= o.checked =3D i;=0A= o.value =3D o.id2val[i];=0A= o.title =3D o.id2title[i];=0A= self.$value.attr({disabled: o.disabled ? 'disabled' : '', value: = o.value});=0A= =0A= fillTo(i, false);=0A= self._disableCancel();=0A= =0A= !o.forceSelect && self.callback(e, 'star');=0A= })=0A= .bind('mouseover.stars', function() {=0A= if(o.disabled) return false;=0A= var i =3D self.$stars.index(this);=0A= fillTo(i, true);=0A= })=0A= .bind('mouseout.stars', function() {=0A= if(o.disabled) return false;=0A= fillTo(self.options.checked, false);=0A= });=0A= =0A= =0A= /*=0A= * Attach cancel event handler=0A= */=0A= this.$cancel.bind('click.stars', function(e) {=0A= if(!o.forceSelect && (o.disabled || o.value =3D=3D o.cancelValue)) = return false;=0A= =0A= o.checked =3D -1;=0A= o.value =3D o.cancelValue;=0A= o.title =3D '';=0A= =0A= self.$value.val(o.value);=0A= o.disableValue && self.$value.attr({disabled: 'disabled'});=0A= =0A= fillNone();=0A= self._disableCancel();=0A= =0A= !o.forceSelect && self.callback(e, 'cancel');=0A= })=0A= .bind('mouseover.stars', function() {=0A= if(self._disableCancel()) return false;=0A= self.$cancel.addClass(o.cancelHoverClass);=0A= fillNone();=0A= self._showCap(o.cancelTitle);=0A= })=0A= .bind('mouseout.stars', function() {=0A= if(self._disableCancel()) return false;=0A= self.$cancel.removeClass(o.cancelHoverClass);=0A= self.$stars.triggerHandler('mouseout.stars');=0A= });=0A= =0A= =0A= /*=0A= * Attach onReset event handler to the parent FORM=0A= */=0A= this.$form.bind('reset.stars', function(){=0A= !o.disabled && self.select(o.defaultValue);=0A= });=0A= =0A= =0A= /*=0A= * Clean up to avoid memory leaks in certain versions of IE 6=0A= */=0A= $(window).unload(function(){=0A= self.$cancel.unbind('.stars');=0A= self.$stars.unbind('.stars');=0A= self.$form.unbind('.stars');=0A= self.$selec =3D self.$rboxs =3D self.$stars =3D self.$value =3D = self.$cancel =3D self.$form =3D null;=0A= });=0A= =0A= =0A= /*=0A= * Star selection helpers=0A= */=0A= function fillTo(index, hover) {=0A= if(index !=3D -1) {=0A= var addClass =3D hover ? o.starHoverClass : o.starOnClass;=0A= var remClass =3D hover ? o.starOnClass : o.starHoverClass;=0A= self.$stars.eq(index).prevAll('.' + = o.starClass).andSelf().removeClass(remClass).addClass(addClass);=0A= self.$stars.eq(index).nextAll('.' + = o.starClass).removeClass(o.starHoverClass + ' ' + o.starOnClass);=0A= self._showCap(o.id2title[index]);=0A= }=0A= else fillNone();=0A= };=0A= function fillNone() {=0A= self.$stars.removeClass(o.starOnClass + ' ' + o.starHoverClass);=0A= self._showCap('');=0A= };=0A= =0A= =0A= /*=0A= * Finally, set up the Stars=0A= */=0A= this.select(o.value);=0A= o.disabled && this.disable();=0A= =0A= },=0A= =0A= /*=0A= * Private functions=0A= */=0A= _disableCancel: function() {=0A= var o =3D this.options, disabled =3D o.disabled || o.oneVoteOnly || = (o.value =3D=3D o.cancelValue);=0A= if(disabled) = this.$cancel.removeClass(o.cancelHoverClass).addClass(o.cancelDisabledCla= ss);=0A= else this.$cancel.removeClass(o.cancelDisabledClass);=0A= this.$cancel.css('opacity', disabled ? 0.5 : 1);=0A= return disabled;=0A= },=0A= _disableAll: function() {=0A= var o =3D this.options;=0A= this._disableCancel();=0A= if(o.disabled) = this.$stars.filter('div').addClass(o.starDisabledClass);=0A= else = this.$stars.filter('div').removeClass(o.starDisabledClass);=0A= },=0A= _showCap: function(s) {=0A= var o =3D this.options;=0A= if(o.captionEl) o.captionEl.text(s);=0A= },=0A= =0A= /*=0A= * Public functions=0A= */=0A= value: function() {=0A= return this.options.value;=0A= },=0A= select: function(val) {=0A= var o =3D this.options, e =3D (val =3D=3D o.cancelValue) ? = this.$cancel : this.$stars.eq(o.val2id[val]);=0A= o.forceSelect =3D true;=0A= e.triggerHandler('click.stars');=0A= o.forceSelect =3D false;=0A= },=0A= selectID: function(id) {=0A= var o =3D this.options, e =3D (id =3D=3D -1) ? this.$cancel : = this.$stars.eq(id);=0A= o.forceSelect =3D true;=0A= e.triggerHandler('click.stars');=0A= o.forceSelect =3D false;=0A= },=0A= enable: function() {=0A= this.options.disabled =3D false;=0A= this._disableAll();=0A= },=0A= disable: function() {=0A= this.options.disabled =3D true;=0A= this._disableAll();=0A= },=0A= destroy: function() {=0A= this.$form.unbind('.stars');=0A= this.$cancel.unbind('.stars').remove();=0A= this.$stars.unbind('.stars').remove();=0A= this.$value.remove();=0A= = this.element.unbind('.stars').html(this.element.data('former.stars')).rem= oveData('stars');=0A= return this;=0A= },=0A= callback: function(e, type) {=0A= var o =3D this.options;=0A= o.callback && o.callback(this, type, o.value, e);=0A= o.oneVoteOnly && !o.disabled && this.disable();=0A= }=0A= });=0A= =0A= $.extend($.ui.stars, {=0A= version: '3.0.1'=0A= });=0A= =0A= })(jQuery);=0A= =0A= /* * ContextMenu - jQuery plugin for right-click context menus * * Author: Chris Domigan * Contributors: Dan G. Switzer, II * Parts of this plugin are inspired by Joern Zaefferer's Tooltip plugin * * Dual licensed under the MIT and GPL licenses: * http://www.opensource.org/licenses/mit-license.php * http://www.gnu.org/licenses/gpl.html * * Version: r2 * Date: 16 July 2007 * * For documentation visit = http://www.trendskitchens.co.nz/jquery/contextmenu/ * */ (function($) { var menu, shadow, trigger, content, hash, currentTarget; var defaults =3D { menuStyle: { listStyle: 'none', padding: '1px', margin: '0px', backgroundColor: '#fff', border: '1px solid #999', width: '100px' }, itemStyle: { margin: '0px', color: '#000', display: 'block', cursor: 'default', padding: '3px', border: '1px solid #fff', backgroundColor: 'transparent' }, itemHoverStyle: { border: '1px solid #0a246a', backgroundColor: '#b6bdd2' }, eventPosX: 'pageX', eventPosY: 'pageY', shadow : true, onContextMenu: null, onShowMenu: null, ctrlClick: false }; $.fn.contextMenu =3D function(id, options) { if (!menu) { // Create = singleton menu menu =3D $('

') .hide() .css({position:'absolute', zIndex:'500'}) .appendTo('body') .bind('click', function(e) { e.stopPropagation(); }); } if (!shadow) { shadow =3D $('

'));=0A= a.click(function(e) {=0A= e.preventDefault();=0A= var $this =3D jQuery(this);=0A= if (!$this.data("clickable")) return;=0A= // stop multi-clicks=0A= $this.data("clickable",false);=0A= LOG("CLICK disabled");=0A= $this.find("img")=0A= .css("cursor","wait")=0A= .fadeTo(100,0.25)=0A= .fadeTo(1800,0.25)=0A= .fadeTo(100,1.0,function() {=0A= $this.data("clickable",true);=0A= $this.find("img").css("opacity","1.0").css("cursor","pointer");=0A= LOG("CLICK enabled");=0A= });=0A= googleTracker('/adclick'+campaign, this.href);=0A= =0A= });=0A= }=0A= }=0A= =0A= function googleTracker(s, href) {=0A= try {=0A= if (typeof urchinTracker !=3D "undefined") {=0A= if (s) {=0A= urchinTracker(s);=0A= } else {=0A= urchinTracker();=0A= }=0A= } else if (typeof _gat !=3D "undefined") {=0A= /* according to=0A= = http://www.google.com/support/googleanalytics/bin/answer.py?answer=3D5552= 7=0A= should be using=0A= pageTracker._trackEvent(category, action);=0A= */=0A= var pageTracker =3D _gat._getTracker(GOOGLE_AC);=0A= if (s) {=0A= pageTracker._trackPageview(s);=0A= } else {=0A= pageTracker._trackPageview();=0A= }=0A= }=0A= } catch (err) {=0A= }=0A= if (href) {=0A= setTimeout('document.location =3D "' + href + '"', 100);=0A= }=0A= }=0A= =0A= =0A= function track_click(x) {=0A= var e =3D jQuery(x);=0A= var href =3D e.attr("href");=0A= var target =3D e.attr("target");=0A= var data =3D e.metadata();=0A= if (data && data.track_type) {=0A= googleTracker('/linkout/'+data.track_type);=0A= }=0A= =0A= // no need at the moment as we've got urchin tracking this=0A= if (false) {=0A= href =3D "/click?url=3D"+encodeURIComponent(href);=0A= if (data) {=0A= if (data.type) {=0A= href =3D href + "&type=3D"+encodeURIComponent(data.type);=0A= }=0A= if (data.track_type) {=0A= href =3D href + "&track_type=3D"+encodeURIComponent(data.track_type);=0A= }=0A= }=0A= }=0A= =0A= // give the GA code time to run.=0A= var f =3D function() {=0A= if (target) {=0A= window.open(href,target);=0A= } else {=0A= document.location=3Dhref;=0A= }=0A= };=0A= setTimeout(f, 100);=0A= =0A= }=0A= =0A= =0A= function trackView(paths) {=0A= if (!paths) {=0A= paths =3D { "paths": [location.pathname]};=0A= } else if (typeof paths =3D=3D "string") {=0A= paths =3D { "paths" : [paths]};=0A= } else {=0A= // assume array=0A= paths =3D { "paths" : paths};=0A= }=0A= var p =3D jQuery.param(paths,true);=0A= jQuery.getJSON("/track_view?"+p+"&callback=3D?", function(){=0A= LOG("trackView "+p);=0A= });=0A= =0A= }=0A= =0A= =0A= function fixTagsBoxPos(isLeft) {=0A= var mainbody =3D jQuery("#mainbody");=0A= if (!mainbody.length) {=0A= mainbody =3D jQuery("#maindiv");=0A= }=0A= if (!mainbody.length) {=0A= ERROR("No #mainbody/#maindiv DIV");=0A= return;=0A= }=0A= =0A= var navright =3D jQuery("#navright");=0A= if (!navright.length) {=0A= LOG("No #navright DIV");=0A= return;=0A= }=0A= =0A= var adj =3D 10;=0A= if (isLeft) {=0A= adj =3D -navright.outerWidth();=0A= }=0A= =0A= var x =3D mainbody.offset().left+mainbody.outerWidth()+adj;=0A= var y =3D mainbody.offset().top;=0A= navright.offset({top: y, left:x});=0A= }=0A= =0A= =0A= function getPref(name, json) {=0A= var v =3D GLOBAL.prefs && GLOBAL.prefs[name];=0A= if (!v) return null;=0A= if (typeof json !=3D 'undefined' && json) {=0A= try {=0A= return eval(v);=0A= } catch (err) {=0A= ERROR(e);=0A= return null;=0A= }=0A= } else {=0A= return v;=0A= }=0A= }=0A= =0A= function getJsonPref(name) {=0A= return getPref(name, true);=0A= }=0A= =0A= =0A= var QUICKLINKS =3D {=0A= init: function() {=0A= var quickLinks;=0A= if (!GLOBAL.username) {=0A= return;=0A= }=0A= jQuery(".ql").remove();=0A= if (GLOBAL.quickLinks) {=0A= var dud =3D false;=0A= quickLinks =3D [];=0A= jQuery.each(GLOBAL.quickLinks,function(i, val){=0A= if (val && val.href && val.label) {=0A= QUICKLINKS.addLink(val.href,val.label);=0A= quickLinks.push(val);=0A= } else {=0A= dud =3D true;=0A= }=0A= });=0A= // An old bug populated the quicklinks with "undefined"=0A= // values. If we've found any, purge them.=0A= if (dud) {=0A= jQuery.getJSON("/pref_set.json",=0A= {"name": "quick_links", "value": jQuery.toJSON(quickLinks)}=0A= ).complete(function() {=0A= LOG("Updated dud quicklinks");=0A= });=0A= }=0A= } else if (1) {=0A= var cookie =3D jQuery.cookie("context_menu_opts");=0A= var parts =3D cookie.split("+");=0A= LOG(parts);=0A= var links =3D {};=0A= jQuery.each(parts,function(i, val){=0A= if (!val.startsWith("cm_quick")) return;=0A= var p =3D val.split("=3D");=0A= links[p[0]] =3D unescape(p[1]);=0A= //QUICKLINKS.addLink();=0A= });=0A= LOG(links);=0A= =0A= quickLinks =3D [];=0A= =0A= var order =3D 1;=0A= jQuery.each([1,2,3],function(i,val){=0A= var label =3D links["cm_quick_n"+val];=0A= var href =3D links["cm_quick_v"+val];=0A= if (href && label) {=0A= QUICKLINKS.addLink(href,label);=0A= var ql =3D {};=0A= ql.href =3D href;=0A= ql.label =3D label;=0A= ql.order =3D order;=0A= quickLinks.push(ql);=0A= order ++;=0A= }=0A= });=0A= jQuery.getJSON("/pref_set.json",=0A= {"name": "quick_links", "value": jQuery.toJSON(quickLinks)}=0A= ).complete(function() {=0A= LOG("Updated quicklinks");=0A= });=0A= =0A= =0A= =0A= }=0A= =0A= },=0A= addLink : function(href,label) {=0A= if (!(href && label)) {=0A= return;=0A= }=0A= var ql =3D jQuery("#quicklinks");=0A= var td =3D jQuery("

"+jQuery.cookie("context_menu_opts"));=0A= jQuery("#logout_button").click(saveUI);=0A= setPublicants();=0A= =0A= jQuery("body").addClass("force-scrollbars");=0A= =0A= try {=0A= jQuery("#dialog").dialog({=0A= bgiframe: true,=0A= autoOpen: false,=0A= modal: true,=0A= width: "600px",=0A= position: ["right", "top"],=0A= resizable: false,=0A= draggable: false,=0A= minHeight: 0,=0A= buttons: {=0A= 'Search': submit_search,=0A= ' Help ': function() {=0A= show_search_help();=0A= }=0A= }=0A= });=0A= } catch (err) {=0A= ERROR(err);=0A= }=0A= =0A= var q =3D jQuery("#q").val();=0A= if (!q) {=0A= q =3D getUIOption("lastsearch");=0A= if (q) {=0A= jQuery("#q").val(q);=0A= }=0A= }=0A= if (getUIOption("srch_unch") =3D=3D "yes") {=0A= jQuery("#srch_unch").attr("checked",true);=0A= }=0A= =0A= =0A= jQuery(".tipsy-hint").tipsy({gravity:"s"});=0A= jQuery(".tipsy-hint-s").tipsy({gravity:"s"});=0A= jQuery(".tipsy-hint-n").tipsy({gravity:"n"});=0A= jQuery(".tipsy-hint-e").tipsy({gravity:"e"});=0A= jQuery(".tipsy-hint-w").tipsy({gravity:"w"});=0A= =0A= jQuery(".support-email").text("support13"+"@"+"citeulike"+".org");=0A= jQuery(".privacy-email").text("privacy"+"@"+"citeulike"+".org");=0A= =0A= // a bit more generic: <... class=3D"email" data-address=3D"support">=0A= jQuery(".email").each(function(){=0A= var $this =3D jQuery(this);=0A= var address =3D $this.data("address");=0A= if (!address) return;=0A= $this.text(address+"@"+"citeulike"+".org");=0A= });=0A= =0A= var hideLeftAd =3D (window.name =3D=3D "citeulike_popup_post");=0A= if (hideLeftAd) {=0A= jQuery(".leftindent").css("margin-left", "0px");=0A= jQuery(".contentmain").css("margin-left", "0px");=0A= jQuery(".contentonly").css("margin-left", "0px");=0A= jQuery("#navleft, .menu").hide();=0A= jkmegamenu.render(jQuery);=0A= }=0A= =0A= if (typeof JQHOTKEYS !=3D "undefined") {=0A= jQuery(document).bind('keydown', 'Ctrl+s', function(){=0A= if (goSearch()) {=0A= return false;=0A= } else {=0A= // legacy for blog-save page=0A= jQuery('#button_update').click();=0A= }=0A= return false;=0A= });=0A= }=0A= =0A= var noTags =3D !GLOBAL.show_tags_nav;=0A= =0A= if (noTags) {=0A= //=0A= } else if (!GLOBAL.showTagsState && jQuery("#navright").length !=3D=3D = 0) {=0A= if (jQuery("#tagsbox").length =3D=3D=3D 0){=0A= jQuery("#navright").wrap("");=0A= }=0A= if (jQuery(".contentmain").length !=3D=3D 0) {=0A= = jQuery(".contentmain").removeClass("contentmain").addClass("contentonly")= ;=0A= }=0A= }=0A= =0A= load_ads();=0A= =0A= if (!noTags && init_tags) {=0A= init_tags();=0A= }=0A= =0A= =0A= if (noTags) {=0A= //=0A= } else if (GLOBAL.showTagsState && jQuery("#navright").length !=3D=3D = 0) {=0A= var tagsBoxWidth =3D getUIOption("tagsBoxWidth",250);=0A= jQuery("#tagsbox").show();=0A= jQuery("#tagsbox").css("display","block");=0A= jQuery("#tagbutton").hide();=0A= jQuery("#navright").css("width",tagsBoxWidth+"px");=0A= populateTagsTable();=0A= var realWidth=3D jQuery("#navright").width();=0A= jQuery(".contentonly").css("margin-right",(realWidth+30)+"px");=0A= jQuery("#taglist .tag_l").css("width",(tagsBoxWidth-40)+"px");=0A= jQuery("#navright").resizable({=0A= ghost: true,=0A= handles: 'w',=0A= stop : function(event, ui) {=0A= tagsBoxResize(true);=0A= },=0A= maxWidth: 600,=0A= minWidth: 180=0A= });=0A= fixTagsBoxPos(false);=0A= jQuery(window).bind("resize", function() {=0A= fixTagsBoxPos(false);=0A= });=0A= } else {=0A= jQuery("#tagbutton").mouseenter(displayTags);=0A= jQuery("#tagbutton").click(displayTags);=0A= }=0A= =0A= jQuery("#tags-pins").qtip({=0A= content: {=0A= text: jQuery("#always_show_tags_help")=0A= },=0A= show: {=0A= event: "mouseover"=0A= },=0A= hide: {=0A= event: "mouseout"=0A= },=0A= position: {=0A= adjust: {=0A= y: 4=0A= },=0A= at: "bottom right",=0A= my: "top right",=0A= viewport: jQuery(window)=0A= }=0A= });=0A= =0A= jQuery("#tags-pins").click(toggleShowTagsState);=0A= jQuery("#tags-pins-on").toggle(GLOBAL.showTagsState);=0A= jQuery("#tags-pins-off").toggle(!GLOBAL.showTagsState);=0A= =0A= jQuery("input:submit, input:button, input:file, button").button();=0A= jQuery("button.likes").find(".ui-button-text").css(=0A= {'background-image':'url('+GLOBAL.imgRoot+'/likes-icon.png)',=0A= 'background-repeat':'no-repeat','padding-left':'32px',=0A= 'background-position':'10px 1px '=0A= });=0A= jQuery("button.searchbtn").button("destroy").button({icons: = {primary:'ui-icon-search'}});=0A= =0A= if (!IE()) {=0A= if (jQuery().selectmenu) {=0A= // Broken=0A= //jQuery("select.uiwidget").selectmenu({maxHeight: 150, style: = 'popup'});=0A= } else {=0A= LOG("jquery.selectmenu not loaded");=0A= }=0A= }=0A= =0A= =0A= jQuery(window).bind("resize", function() {=0A= jkmegamenu.render(jQuery);=0A= LOG("Re-rendering jk-menus (resize)");=0A= });=0A= =0A= =0A= jkmegamenu.render(jQuery);=0A= =0A= QUICKLINKS.init();=0A= =0A= if (GLOBAL.is_gold_user) {=0A= jQuery(".if_gold_user").show();=0A= } else {=0A= jQuery(".if_not_gold_user").show();=0A= }=0A= =0A= LOG("OK - logging started");=0A= =0A= jQuery("#accept_cookie_terms").click(accept_eu_cookie_terms);=0A= =0A= });=0A= =0A= /************************************************************************= ******/=0A= /* Simple JavaScript Inheritance=0A= * By John Resig http://ejohn.org/=0A= * MIT Licensed.=0A= * http://ejohn.org/blog/simple-javascript-inheritance/=0A= */=0A= // Inspired by base2 and Prototype=0A= (function(){=0A= var initializing =3D false, fnTest =3D /xyz/.test(function(){xyz;}) ? = /\b_super\b/ : /.*/;=0A= // The base Class implementation (does nothing)=0A= this.Class =3D function(){};=0A= =0A= // Create a new Class that inherits from this class=0A= Class.extend =3D function(prop) {=0A= var _super =3D this.prototype;=0A= =0A= // Instantiate a base class (but only create the instance,=0A= // don't run the init constructor)=0A= initializing =3D true;=0A= var prototype =3D new this();=0A= initializing =3D false;=0A= =0A= // 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